LongGF: computational algorithm and software tool for fast and accurate detection of gene fusions by long-read transcriptome sequencing.
Qian LiuYu HuAndres StuckyLi FangJiang F ZhongKai WangPublished in: BMC genomics (2020)
In summary, LongGF will greatly facilitate the discovery of candidate gene fusion events from long-read RNA-Seq data, especially in cancer samples. LongGF is implemented in C++ and is available at https://github.com/WGLab/LongGF .
Keyphrases
- rna seq
- single cell
- genome wide
- high throughput
- copy number
- single molecule
- papillary thyroid
- machine learning
- small molecule
- genome wide identification
- gene expression
- data analysis
- electronic health record
- big data
- high resolution
- squamous cell
- loop mediated isothermal amplification
- transcription factor
- label free
- real time pcr
- mass spectrometry
- sensitive detection