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Saving time maintaining reliability: a new method for quantification of Tetranychus urticae damage in Arabidopsis whole rosettes.

Dairon Ojeda-MartinezManuel MartinezIsabel DiazMaria Estrella Santamaria
Published in: BMC plant biology (2020)
The novel approach using Ilastik and Fiji programs entails a great improvement for the quantification of the specific spider mite damage in Arabidopsis whole rosettes. The automation of the proposed method based on interactive machine learning eliminates the subjectivity and inter-rater-variability of the previous manual protocol. Besides, this method offers a robust tool for time saving and to avoid the damage overestimation observed with other methods.
Keyphrases
  • machine learning
  • oxidative stress
  • transcription factor
  • randomized controlled trial
  • public health
  • artificial intelligence
  • cell wall
  • big data