Coevolution of non-homologous end joining efficiency and encephalization.
Ion UdroiuAntonella SguraPublished in: Journal of evolutionary biology (2024)
Double-strand breaks (DSB), the most difficult to repair DNA damage, are mainly repaired by non-homologous end-joining (NHEJ) or homologous recombination (HR). Previous studies seem to indicate that primates, and particularly humans, have a better NHEJ system. A distinctive feature of the primate lineage (beside longevity) is encephalization, i.e., the expansion of the brain relative to body mass (BM). Using existing transcriptome data from 34 mammalian species, we investigated the possible correlations between the expression of genes involved in NHEJ and encephalization, BM, and longevity. The same was done also for genes involved in the HR pathway. We found that, while HR gene expression is better correlated with longevity, NHEJ gene expression is strongly (and better) correlated with encephalization. Since the brain is composed of postmitotic cells, DSB repair should be mainly performed by NHEJ in this organ. Therefore, we interpret the correlation we found as an indication that NHEJ efficiency coevolved with encephalization.
Keyphrases
- dna repair
- dna damage
- gene expression
- dna methylation
- oxidative stress
- induced apoptosis
- white matter
- poor prognosis
- machine learning
- drosophila melanogaster
- single cell
- genome wide
- electronic health record
- mass spectrometry
- deep learning
- rna seq
- cerebral ischemia
- cell death
- endoplasmic reticulum stress
- binding protein
- atomic force microscopy
- big data
- brain injury
- cell proliferation