Genome-Wide Characterization and Abiotic Stresses Expression Analysis of Annexin Family Genes in Poplar.
Hui WeiAli MovahediGuoyuan LiuYixin LiShiwei LiuChunmei YuYanhong ChenFei ZhongJian ZhangPublished in: International journal of molecular sciences (2022)
Poplar is an illustrious industrial woody plant with rapid growth, providing a range of materials, and having simple post-treatment. Various kinds of environmental stresses limit its output. Plant annexin (ANN) is a calcium-dependent phospholipid-binding protein involved in plant metabolism, growth and development, and cooperatively regulating drought resistance, salt tolerance, and various stress responses. However, the features of the PtANN gene family and different stress responses remain unknown in poplar. This study identified 12 PtANN genes in the P. trichocarpa whole-genome and PtANNs divided into three subfamilies based on the phylogenetic tree. The PtANNs clustered into the same clade shared similar gene structures and conserved motifs. The 12 PtANN genes were located in ten chromosomes, and segmental duplication events were illustrated as the main duplication method. Additionally, the PtANN4 homogenous with AtANN1 was detected localized in the cytoplasm and plasma membrane. In addition, expression levels of PtANNs were induced by multiple abiotic stresses, which indicated that PtANNs could widely participate in response to abiotic stress. These results revealed the molecular evolution of PtANNs and their profiles in response to abiotic stress.
Keyphrases
- genome wide identification
- transcription factor
- genome wide
- binding protein
- dna methylation
- poor prognosis
- heavy metals
- climate change
- heat stress
- wastewater treatment
- genome wide analysis
- arabidopsis thaliana
- high resolution
- plant growth
- stress induced
- long non coding rna
- single molecule
- replacement therapy
- sensitive detection