Rapid head-pose detection for automated slice prescription of fetal-brain MRI.
Malte HoffmannEsra Abaci TurkBorjan GagoskiLeah MorganPaul WightonM Dylan TisdallMartin ReuterElfar AdalsteinssonP Ellen GrantLawrence L WaldAndré J W van der KouwePublished in: International journal of imaging systems and technology (2021)
In fetal-brain MRI, head-pose changes between prescription and acquisition present a challenge to obtaining the standard sagittal, coronal and axial views essential to clinical assessment. As motion limits acquisitions to thick slices that preclude retrospective resampling, technologists repeat ~55-second stack-of-slices scans (HASTE) with incrementally reoriented field of view numerous times, deducing the head pose from previous stacks. To address this inefficient workflow, we propose a robust head-pose detection algorithm using full-uterus scout scans (EPI) which take ~5 seconds to acquire. Our ~2-second procedure automatically locates the fetal brain and eyes, which we derive from maximally stable extremal regions (MSERs). The success rate of the method exceeds 94% in the third trimester, outperforming a trained technologist by up to 20%. The pipeline may be used to automatically orient the anatomical sequence, removing the need to estimate the head pose from 2D views and reducing delays during which motion can occur.
Keyphrases
- optic nerve
- contrast enhanced
- magnetic resonance imaging
- white matter
- loop mediated isothermal amplification
- resting state
- machine learning
- deep learning
- optical coherence tomography
- high resolution
- cerebral ischemia
- magnetic resonance
- cross sectional
- label free
- blood brain barrier
- real time pcr
- high speed
- body composition
- amino acid
- resistance training
- brain injury
- sensitive detection