Crystal structure of bacteriophage T4 Spackle as determined by native SAD phasing.
Ke ShiFredy KurniawanSurajit BanerjeeNicholas H MoellerHideki AiharaPublished in: Acta crystallographica. Section D, Structural biology (2020)
The crystal structure of a bacteriophage T4 early gene product, Spackle, was determined by native sulfur single-wavelength anomalous diffraction (SAD) phasing using synchrotron radiation and was refined to 1.52 Å resolution. The structure shows that Spackle consists of a bundle of five α-helices, forming a relatively flat disc-like overall shape. Although Spackle forms a dimer in the crystal, size-exclusion chromatography with multi-angle light scattering shows that it is monomeric in solution. Mass spectrometry confirms that purified mature Spackle lacks the amino-terminal signal peptide and contains an intramolecular disulfide bond, consistent with its proposed role in the periplasm of T4 phage-infected Escherichia coli cells. The surface electrostatic potential of Spackle shows a strikingly bipolar charge distribution, suggesting a possible mode of membrane association and inhibition of the tail lysozyme activity in T4 bacteriophage superinfection exclusion.
Keyphrases
- mass spectrometry
- escherichia coli
- liquid chromatography
- induced apoptosis
- high resolution
- cell cycle arrest
- pseudomonas aeruginosa
- bipolar disorder
- high speed
- copy number
- genome wide
- tandem mass spectrometry
- gas chromatography
- capillary electrophoresis
- gene expression
- molecular dynamics simulations
- endoplasmic reticulum stress
- single molecule
- cell death
- dna methylation
- risk assessment
- crystal structure