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Chromosome-scale genome assembly of oil-tea tree Camellia crapnelliana.

Fen ZhangLi-Ying FengPei-Fan LinJu-Jin JiaLi-Zhi Gao
Published in: Scientific data (2024)
Camellia crapnelliana Tutch., belonging to the Theaceae family, is an excellent landscape tree species with high ornamental values. It is particularly an important woody oil-bearing plant species with high ecological, economic, and medicinal values. Here, we first report the chromosome-scale reference genome of C. crapnelliana with integrated technologies of SMRT, Hi-C and Illumina sequencing platforms. The genome assembly had a total length of ~2.94 Gb with contig N50 of ~67.5 Mb, and ~96.34% of contigs were assigned to 15 chromosomes. In total, we predicted 37,390 protein-coding genes, ~99.00% of which could be functionally annotated. The chromosome-scale genome of C. crapnelliana will become valuable resources for understanding the genetic basis of the fatty acid biosynthesis, and greatly facilitate the exploration and conservation of C. crapnelliana.
Keyphrases
  • genome wide
  • fatty acid
  • copy number
  • dna methylation
  • binding protein
  • amino acid