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Expansion spatial transcriptomics.

Yuhang FanŽaneta AndrusivováYunming WuChew ChaiLudvig LarssonMengxiao HeLiqun LuoJoakim LundebergBo Wang
Published in: Nature methods (2023)
Capture array-based spatial transcriptomics methods have been widely used to resolve gene expression in tissues; however, their spatial resolution is limited by the density of the array. Here we present expansion spatial transcriptomics to overcome this limitation by clearing and expanding tissue prior to capturing the entire polyadenylated transcriptome with an enhanced protocol. This approach enables us to achieve higher spatial resolution while retaining high library quality, which we demonstrate using mouse brain samples.
Keyphrases
  • gene expression
  • single cell
  • rna seq
  • high throughput
  • randomized controlled trial
  • dna methylation
  • single molecule
  • genome wide