RP11-362K2.2:RP11-767I20.1 Genetic Variation Is Associated with Post-Reperfusion Therapy Parenchymal Hematoma. A GWAS Meta-Analysis.
Elena MuiñoJara Cárcel-MárquezCaty CarreraLaia Llucià-CarolCristina Gallego-FábregaNatalia CullellMiquel LledósJosé CastilloTomás SobrinoFrancisco CamposEmilio Rodríguez-CastroMònica MillánLucia Muñoz-NarbonaAlejandro BustamanteElena López-CancioMarc RibóJosé Álvarez-SabínJordi Jiménez-CondeJaume RoquerEva Giralt-SteinhauerCarolina Soriano-TárragaCristófol Vives-BauzaRosa Díaz-NavarroSilvia TurVictor ObachJuan Francisco ArenillasTomas SeguraGemma Serrano-HerasJoan Martí-FàbregasRaquel Delgado-MederosPol Camps-RenomLuis Prats-SánchezDaniel GuisadoMarina GuaschRebeca MarinAlejandro Martínez-DomeñoMaria Del Mar Freijo-GuerreroFrancisco MonicheJuan Antonio CabezasMar CastellanosJerzy KrupinskyDaniel StrbianTurgut TatlisumakVincent ThijsRobin LemmensAgnieszka SlowikJoanna PeraLaura HeitschLaura IbañezCruchaga CarlosRajat DharJin-Moo LeeJoan MontanerIsrael Fernández-CadenasOn Behalf Of International Stroke Genetic ConsortiumThe Spanish Stroke Genetic ConsortiumPublished in: Journal of clinical medicine (2021)
Stroke is one of the most common causes of death and disability. Reperfusion therapies are the only treatment available during the acute phase of stroke. Due to recent clinical trials, these therapies may increase their frequency of use by extending the time-window administration, which may lead to an increase in complications such as hemorrhagic transformation, with parenchymal hematoma (PH) being the more severe subtype, associated with higher mortality and disability rates. Our aim was to find genetic risk factors associated with PH, as that could provide molecular targets/pathways for their prevention/treatment and study its genetic correlations to find traits sharing genetic background. We performed a GWAS and meta-analysis, following standard quality controls and association analysis (fastGWAS), adjusting age, NIHSS, and principal components. FUMA was used to annotate, prioritize, visualize, and interpret the meta-analysis results. The total number of patients in the meta-analysis was 2034 (216 cases and 1818 controls). We found rs79770152 having a genome-wide significant association (beta 0.09, p-value 3.90 × 10-8) located in the RP11-362K2.2:RP11-767I20.1 gene and a suggestive variant (rs13297983: beta 0.07, p-value 6.10 × 10-8) located in PCSK5 associated with PH occurrence. The genetic correlation showed a shared genetic background of PH with Alzheimer's disease and white matter hyperintensities. In addition, genes containing the ten most significant associations have been related to aggregated amyloid-β, tau protein, white matter microstructure, inflammation, and matrix metalloproteinases.
Keyphrases
- genome wide
- systematic review
- white matter
- dna methylation
- copy number
- multiple sclerosis
- meta analyses
- clinical trial
- atrial fibrillation
- end stage renal disease
- oxidative stress
- ejection fraction
- randomized controlled trial
- chronic kidney disease
- gene expression
- healthcare
- heart failure
- risk factors
- cardiovascular disease
- peritoneal dialysis
- stem cells
- combination therapy
- cerebrospinal fluid
- cardiovascular events
- smoking cessation
- acute coronary syndrome
- early onset
- bone marrow
- newly diagnosed
- cognitive decline
- patient reported outcomes
- prognostic factors
- coronary artery disease
- transcription factor
- replacement therapy