Analyses of canine cancer mutations and treatment outcomes using real-world clinico-genomics data of 2119 dogs.
Kevin WuLucas RodriguesGerald PostGarrett HarveyMichelle E WhiteAubrey MillerLindsay LambertBenjamin LewisChristina LopesJames ZouPublished in: NPJ precision oncology (2023)
Spontaneous tumors in canines share significant genetic and histological similarities with human tumors, positioning them as valuable models to guide drug development. However, current translational studies have limited real world evidence as cancer outcomes are dispersed across veterinary clinics and genomic tests are rarely performed on dogs. In this study, we aim to expand the value of canine models by systematically characterizing genetic mutations in tumors and their response to targeted treatments. In total, we collect and analyze survival outcomes for 2119 tumor-bearing dogs and the prognostic effect of genomic alterations in a subset of 1108 dogs. Our analysis identifies prognostic concordance between canines and humans in several key oncogenes, including TP53 and PIK3CA. We also find that several targeted treatments designed for humans are associated with a positive prognosis when used to treat canine tumors with specific genomic alterations, underscoring the value of canine models in advancing drug discovery for personalized oncology.
Keyphrases
- copy number
- drug discovery
- papillary thyroid
- genome wide
- squamous cell
- primary care
- endothelial cells
- cancer therapy
- palliative care
- type diabetes
- squamous cell carcinoma
- single cell
- metabolic syndrome
- big data
- young adults
- adipose tissue
- lymph node metastasis
- insulin resistance
- induced pluripotent stem cells
- electronic health record
- childhood cancer
- protein kinase
- pluripotent stem cells