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Evaluating and implementing block jackknife resampling Mendelian randomization to mitigate bias induced by overlapping samples.

Si FangGibran HemaniTom G RichardsonTom R GauntGeorge Davey Smith
Published in: Human molecular genetics (2022)
Participant overlap can induce overfitting bias into Mendelian randomization (MR) and polygenic risk score (PRS) studies. Here, we evaluated a block jackknife resampling framework for genome-wide association studies (GWAS) and PRS construction to mitigate overfitting bias in MR analyses and implemented this study design in a causal inference setting using data from the UK Biobank.
Keyphrases
  • genome wide association
  • case control
  • contrast enhanced
  • magnetic resonance
  • electronic health record
  • big data
  • magnetic resonance imaging
  • cross sectional
  • machine learning
  • artificial intelligence