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Genome Sequence Resource for the Oomycete Taro Pathogen Phytophthora colocasiae.

Ramesh Raju VetukuriSandeep K KushwahaDiya SenStephen C WhissonKurt H LamourLaura J Grenville-Briggs
Published in: Molecular plant-microbe interactions : MPMI (2018)
Phytophthora colocasiae is a phytopathogenic oomycete that causes leaf blight and corm rot on taro (Colocasia esculenta), an important staple crop in the tropics. The impact of P. colocasiae is a serious concern for food security in Asian and Oceanic regions. Vietnamese strain 7290 of P. colocasiae was sequenced (Illumina) to assemble a draft genome of 56.6 Mb, comprised of 19,853 scaffolds and 19,984 predicted protein-coding genes. As in other Phytophthora species, P. colocasiae possesses numerous pathogenicity-related genes, such as the RxLR class of effectors. This draft genome sequence of P. colocasiae provides a resource to underpin the first steps in determining the molecular mechanisms of disease development in this pathosystem.
Keyphrases
  • genome wide
  • amino acid
  • dna methylation
  • tissue engineering
  • candida albicans
  • global health
  • biofilm formation
  • type iii
  • public health
  • escherichia coli
  • small molecule
  • pseudomonas aeruginosa