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SuPreMo: a computational tool for streamlining in silico perturbation using sequence-based predictive models.

Ketrin GjoniKatherine S Pollard
Published in: Bioinformatics (Oxford, England) (2024)
SuPreMo was written in Python, and can be run using only one line of code to generate both sequences and 3D genome disruption scores. The codebase, instructions for installation and use, and tutorials are on the GitHub page: https://github.com/ketringjoni/SuPreMo.
Keyphrases
  • molecular docking
  • genome wide
  • gene expression
  • amino acid