Dissection of the IDA promoter identifies WRKY transcription factors as abscission regulators in Arabidopsis.
Sergio Galindo-TrigoAnne-Maarit BågmanTakashi IshidaShinichiro SawaSiobhán M BradyMelinka A ButenkoPublished in: Journal of experimental botany (2024)
Plants shed organs such as leaves, petals, or fruits through the process of abscission. Monitoring cues such as age, resource availability, and biotic and abiotic stresses allow plants to abscise organs in a timely manner. How these signals are integrated into the molecular pathways that drive abscission is largely unknown. The INFLORESCENCE DEFICIENT IN ABSCISSION (IDA) gene is one of the main drivers of floral organ abscission in Arabidopsis and is known to transcriptionally respond to most abscission-regulating cues. By interrogating the IDA promoter in silico and in vitro, we identified transcription factors that could potentially modulate IDA expression. We probed the importance of ERF- and WRKY-binding sites for IDA expression during floral organ abscission, with WRKYs being of special relevance to mediate IDA up-regulation in response to biotic stress in tissues destined for separation. We further characterized WRKY57 as a positive regulator of IDA and IDA-like gene expression in abscission zones. Our findings highlight the promise of promoter element-targeted approaches to modulate the responsiveness of the IDA signaling pathway to harness controlled abscission timing for improved crop productivity.
Keyphrases
- transcription factor
- genome wide identification
- gene expression
- dna binding
- signaling pathway
- poor prognosis
- dna methylation
- climate change
- genome wide
- big data
- mass spectrometry
- oxidative stress
- epithelial mesenchymal transition
- pi k akt
- long non coding rna
- binding protein
- cancer therapy
- copy number
- machine learning
- induced apoptosis
- molecular docking