Competitive Intramolecular Hydrogen Bonding: Offering Molecules a Choice.
Yu SunEvelyn R MortonHunaida BhabhaEwan R ClarkDejan-Krešimir BučarVictoria Barros-MetlovaJamie A GouldAbil E AlievCally J E HaynesPublished in: ChemPlusChem (2024)
The conformational preferences of N-((6-methylpyridin-2-yl)carbamothioyl)benzamide were studied in solution, the gas phase and the solid state via a combination of NMR, density functional theory (DFT) and single crystal X-ray techniques. This acyl thiourea derivative can adopt two classes of low energy conformation, each stabilized by a different 6-membered intramolecular hydrogen bond (IHB) pseudoring. Analysis in different solvents revealed that the conformational preference of this molecule is polarity dependent, with increasingly polar environments yielding a higher proportion of the minor conformer containing an NH⋅⋅⋅N IHB. The calculated barrier to interconversion is consistent with dynamic behaviour at room temperature, despite the propensity of 6-membered IHB pseudorings to be static. This work demonstrates that introducing competitive IHB pathways can render static IHBs more dynamic and that such systems could have potential as chameleons in drug design.
Keyphrases
- solid state
- density functional theory
- room temperature
- molecular dynamics
- ionic liquid
- molecular dynamics simulations
- single molecule
- high resolution
- energy transfer
- single cell
- decision making
- molecular docking
- emergency department
- fatty acid
- dual energy
- drug induced
- mass spectrometry
- adverse drug
- electron microscopy