Clinical utility of polygenic scores for cardiometabolic disease in Arabs.
Injeong ShimHiroyuki KuwaharaNingning ChenMais O HashemLama AlAbdiMohamed AbouelhodaHong-Hee WonPradeep NatarajanPatrick T EllinorAmit V KheraXin GaoFowzan Sami AlkurayaAkl C FahedPublished in: Nature communications (2023)
Arabs account for 5% of the world population and have a high burden of cardiometabolic disease, yet clinical utility of polygenic risk prediction in Arabs remains understudied. Among 5399 Arab patients, we optimize polygenic scores for 10 cardiometabolic traits, achieving a performance that is better than published scores and on par with performance in European-ancestry individuals. Odds ratio per standard deviation (OR per SD) for a type 2 diabetes score was 1.83 (95% CI 1.74-1.92), and each SD of body mass index (BMI) score was associated with 1.18 kg/m 2 difference in BMI. Polygenic scores associated with disease independent of conventional risk factors, and also associated with disease severity-OR per SD for coronary artery disease (CAD) was 1.78 (95% CI 1.66-1.90) for three-vessel CAD and 1.41 (95% CI 1.29-1.53) for one-vessel CAD. We propose a pragmatic framework leveraging public data as one way to advance equitable clinical implementation of polygenic scores in non-European populations.
Keyphrases
- coronary artery disease
- body mass index
- type diabetes
- risk factors
- healthcare
- end stage renal disease
- weight gain
- percutaneous coronary intervention
- primary care
- newly diagnosed
- chronic kidney disease
- cardiovascular events
- heart failure
- coronary artery bypass grafting
- emergency department
- peritoneal dialysis
- physical activity
- dna methylation
- study protocol
- electronic health record
- acute coronary syndrome
- data analysis
- prognostic factors
- atrial fibrillation
- skeletal muscle
- aortic valve
- genetic diversity
- patient reported
- genome wide association study