Genome-Wide Association Study and transcriptome analysis reveals a complex gene network that regulates opsin gene expression and cell fate determination in Drosophila R7 photoreceptor cells.
John C AldrichLauren A VanderlindenThomas L JacobsenCheyret WoodLaura M SabaSteven G BrittPublished in: bioRxiv : the preprint server for biology (2024)
Collectively, these results suggest that the relatively simple, binary cell fate decision underlying R7 opsin expression is modulated by a larger, more complex network of regulatory factors. Of particular interest are a subset of candidate genes with previously characterized neuronal functions including neurogenesis, neurodegeneration, photoreceptor development, axon growth and guidance, synaptogenesis, and synaptic function.
Keyphrases
- cell fate
- genome wide association study
- gene expression
- induced apoptosis
- poor prognosis
- cell cycle arrest
- dna methylation
- cerebral ischemia
- genome wide
- transcription factor
- copy number
- endoplasmic reticulum stress
- solid phase extraction
- decision making
- oxidative stress
- signaling pathway
- cell death
- binding protein
- cell proliferation
- prefrontal cortex
- blood brain barrier
- pi k akt
- optical coherence tomography