Login / Signup

Drug-Drug Interaction Predictions via Knowledge Graph and Text Embedding: Instrument Validation Study.

Meng WangHaofen WangXing LiuXinyu MaBeilun Wang
Published in: JMIR medical informatics (2021)
We propose a novel framework, Predicting Rich DDI, to predict DDIs. Using rich DDI information, it can competently predict multiple labels for a pair of drugs across numerous domains, ranging from pharmacological mechanisms to side effects. To the best of our knowledge, this framework is the first to provide a joint translation-based embedding model that learns DDIs by integrating drug knowledge graphs and biomedical text simultaneously in a common low-dimensional space. The model also predicts DDIs using multiple labels rather than single or binary labels. Extensive experiments were conducted on real-world data sets to demonstrate the effectiveness and efficiency of the model. The results show our proposed framework outperforms several state-of-the-art baselines.
Keyphrases
  • healthcare
  • randomized controlled trial
  • smoking cessation
  • emergency department
  • adverse drug
  • electronic health record
  • machine learning
  • convolutional neural network
  • health information
  • deep learning