IGF2 is Deregulated During the Development of Uterine Cervical Carcinoma in Indian Patients.
Anirban RoychowdhurySudip SamadderDipanjana Indra MazumderPijush DasMukta BasuRanajit MondalAnup RoySusanta RoychoudhuryChinmay Kumar PandaPublished in: Biochemical genetics (2019)
Uterine cervical carcinoma (CACX) is one of the leading causes of deaths in Indian women. Chromosomal alterations including 11p15.5 locus were reported in CACX. Consequently, we strived for the first time to understand the molecular status of the candidate gene Insulin-like growth factor 2, IGF2 (11p15.5) in Indian CACX patients (n = 128). DNA copy number (CN) analysis using CGH-SNP analysis showed no genetic alteration and it was further validated by comparison with publicly available CN datasets. But promoter hypo-methylation during the progression of CACX was observed and also found to be concordant with publicly available DNA methylation datasets. Interestingly, we found diverse expression of IGF2 transcript in both normal cervical epithelium (NCE) and CACX tumors. Similar heterogeneous expression pattern was seen in publicly available expression datasets as well. Finally, protein expression analysis in NCE showed concordance with transcript expression but tumors showed frequent low expression. Log-rank test showed a difference (p-value = 0.057) in overall survival between cases with and without alteration for IGF2 in Indian CACX patients. Collectively, our study proposes that regulation of IGF2 expression in NCE appeared to be multifaceted and deregulation during the development of CACX resulted in the differential expression.
Keyphrases
- poor prognosis
- copy number
- binding protein
- dna methylation
- genome wide
- end stage renal disease
- ejection fraction
- newly diagnosed
- prognostic factors
- gene expression
- type diabetes
- long non coding rna
- squamous cell carcinoma
- metabolic syndrome
- lymph node metastasis
- polycystic ovary syndrome
- patient reported
- single molecule
- small molecule
- signaling pathway
- free survival
- pregnancy outcomes
- clinical evaluation