The Web-Based Portal SpatialTME Integrates Histological Images with Single-Cell and Spatial Transcriptomics to Explore the Tumor Microenvironment.

Jintong Shi Xia Wei Zhenzhen Xun Xinyu Ding Yao Liu Lian-Xin Liu Youqiong Ye

Published in: Cancer research (2024)

SpatialTME provides spatial structure, cellular composition, expression, function, and cell-cell interaction information to enable investigations into the tumor microenvironment at the spatial level to advance understanding of cancer development and treatment.

Keyphrases

single cell
rna seq
high throughput
cell therapy
poor prognosis
papillary thyroid
deep learning
combination therapy
lymph node metastasis
bone marrow
squamous cell
replacement therapy