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Integration of proteome and transcriptome refines key molecular processes underlying oil production in Nannochloropsis oceanica.

Wuxin YouLi WeiYanhai GongMohamed El HajjamiJian XuAnsgar Poetsch
Published in: Biotechnology for biofuels (2020)
This study adds a proteome perspective on the major pathways for TAG accumulation in Nannochloropsis spp. Temporal changes of proteome exhibited distinct adaptation phases that are usually delayed relative to transcriptomic responses. Notably, proteome data revealed that photosynthesis and carbon fixation are still ongoing even after 48 h of N-. Moreover, sometimes completely opposite trends in proteome and transcriptome demonstrate the relevance of underexplored post-transcriptional regulation for N- adaptation.
Keyphrases
  • single cell
  • rna seq
  • gene expression
  • electronic health record
  • artificial intelligence
  • machine learning
  • big data
  • fatty acid
  • deep learning
  • single molecule