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A Novel Long-Range n to π* Interaction Secures the Smallest known α-Helix in Water.

Huy N HoangChongyang WuTimothy A HillAline Dantas de AraujoPaul V BernhardtLigong LiuDavid P Fairlie
Published in: Angewandte Chemie (International ed. in English) (2019)
The introduction of an amide bond linking side chains of the first and fifth amino acids forms a cyclic pentapeptide that optimally stabilizes the smallest known α-helix in water. The origin of the stabilization is unclear. The observed dependence of α-helicity on the solvent and cyclization linker led us to discover a novel long-range n to π* interaction between a main-chain amide oxygen and a uniquely positioned carbonyl group in the linker of cyclic pentapeptides. CD and NMR spectra, NMR and X-ray structures, modelling, and MD simulations reveal that this first example of a synthetically incorporated long-range n to π* CO⋅⋅⋅Cγ =Ο interaction uniquely enforces an almost perfect and remarkably stable peptide α-helix in water but not in DMSO. This unusual interaction with a covalent amide bond outside the helical backbone suggests new approaches to synthetically stabilize peptide structures in water.
Keyphrases
  • high resolution
  • magnetic resonance
  • molecular dynamics
  • dna binding
  • amino acid
  • transcription factor