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Multiple regulatory variants located in cell type-specific enhancers within the PKP2 locus form major risk and protective haplotypes for canine atopic dermatitis in German shepherd dogs.

Katarina TengvallSergey KozyrevMarcin KierczakKerstin BergvallFabiana H G FariasBrita Ardesjö-LundgrenMia OlssonEva MurénRagnvi HagmanTosso LeebGerli PielbergÅke HedhammarGöran AnderssonKerstin Lindblad-Toh
Published in: BMC genetics (2016)
Our experiments indicate that multiple CAD-associated genetic variants located in cell type-specific enhancers are involved in gene regulation in different cells and tissues. No single causative variant alone, but rather multiple variants combined in a risk haplotype likely contribute to an altered expression of the PKP2 gene, and possibly nearby genes, in immune and epithelial cells, and predispose GSDs to CAD.
Keyphrases
  • copy number
  • coronary artery disease
  • atopic dermatitis
  • genome wide
  • induced apoptosis
  • poor prognosis
  • gene expression
  • cell cycle arrest
  • dna methylation
  • pi k akt