Long Non-Coding RNA Bmdsx-AS1 Effects on Male External Genital Development in Silkworm.
Kai-Xuan WangChun-Bing ChenQiu-Xing WanXing-Fu ZhaPublished in: Insects (2022)
Long non-coding RNAs (lncRNAs) have been suggested to play important roles in some biological processes. However, the detailed mechanisms are not fully understood. We previously identified an antisense lncRNA, Bmdsx-AS1 , that is involved in pre-mRNA splicing of the sex-determining gene Bmdsx in the silkworm. In this study, we analyzed the changes in the male external genitalia of transgenic overexpressed Bmdsx-AS1 silkworm lines and analyzed downstream and upstream responses. We found that Bmdsx-AS1 transgenic silkworms, compared with wild type, showed more claspers in the male external genitalia. Quantitative real-time PCR (qPCR) results indicated that overexpression of Bmdsx-AS1 decreased the expression of genes in the EGFR signaling pathway. Knockdown of Bmdsx-AS1 increased the activity of the EGFR pathway. Through promoter prediction, promoter truncation and electrophoretic mobility shift assay (EMSA) analyses, we found that the protein encoded by the Hox gene BmAbd-B specifically binds to the promoter of Bmdsx-AS1 . Moreover, overexpression of BmAbd-B in the silkworm BmE cell line indicated that BmAbd-B negatively regulates the mRNA expression of Bmdsx-AS1 . Our study provides insights into the regulatory mechanism of the lncRNA in the silkworm.
Keyphrases
- long non coding rna
- poor prognosis
- transcription factor
- dna methylation
- genome wide identification
- small cell lung cancer
- genome wide
- gene expression
- signaling pathway
- cell proliferation
- wild type
- epidermal growth factor receptor
- binding protein
- epithelial mesenchymal transition
- high resolution
- small molecule
- oxidative stress
- protein protein
- bioinformatics analysis