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Fast and exact quantification of motif occurrences in biological sequences.

Mattia A ProsperiSimone MariniChristina Boucher
Published in: BMC bioinformatics (2021)
The motif_prob software is a multi-platform and efficient open source solution for calculating exact frequency distributions of motifs. It can be integrated with motif discovery/characterization tools for quantifying enrichment and deviation from expected frequency ranges with exact p values, without loss in data processing efficiency.
Keyphrases
  • density functional theory
  • high throughput
  • small molecule
  • electronic health record
  • molecular dynamics
  • machine learning