Machine learning for fast identification of bacteraemia in SIRS patients treated on standard care wards: a cohort study.
Franz RatzingerHelmuth HaslacherThomas PerkmannMatilde PinzanPhilip AnnerAthanasios MakristathisHeinz BurgmannGeorg HeinzeGeorg DorffnerPublished in: Scientific reports (2018)
Bacteraemia is a life-threating condition requiring immediate diagnostic and therapeutic actions. Blood culture (BC) analyses often result in a low true positive result rate, indicating its improper usage. A predictive model might assist clinicians in deciding for whom to conduct or to avoid BC analysis in patients having a relevant bacteraemia risk. Predictive models were established by using linear and non-linear machine learning methods. To obtain proper data, a unique data set was collected prior to model estimation in a prospective cohort study, screening 3,370 standard care patients with suspected bacteraemia. Data from 466 patients fulfilling two or more systemic inflammatory response syndrome criteria (bacteraemia rate: 28.8%) were finally used. A 29 parameter panel of clinical data, cytokine expression levels and standard laboratory markers was used for model training. Model tuning was performed in a ten-fold cross validation and tuned models were validated in a test set (80:20 random split). The random forest strategy presented the best result in the test set validation (ROC-AUC: 0.729, 95%CI: 0.679-0.779). However, procalcitonin (PCT), as the best individual variable, yielded a similar ROC-AUC (0.729, 95%CI: 0.679-0.779). Thus, machine learning methods failed to improve the moderate diagnostic accuracy of PCT.
Keyphrases
- machine learning
- big data
- end stage renal disease
- inflammatory response
- electronic health record
- ejection fraction
- palliative care
- healthcare
- newly diagnosed
- chronic kidney disease
- artificial intelligence
- prognostic factors
- poor prognosis
- climate change
- deep learning
- data analysis
- high intensity
- chronic pain
- pain management
- patient reported
- breast cancer risk