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Presence of onco-fetal neighborhoods in hepatocellular carcinoma is associated with relapse and response to immunotherapy.

Ziyi LiRhea PaiSaurabh GuptaJennifer CurrentiWei GuoAnna Di BartolomeoHao FengZi-Jie ZhangZhizhen LiLongqi LiuAbhishek SinghYinqi BaiBicheng YangArchita MishraKatharine YangLiang QiaoMichael WallaceYujia YinQiang XiaJerry Kok Yen ChanJacob GeorgePierce Kah-Hoe ChowFlorent GinhouxAnkur Sharma
Published in: Nature cancer (2024)
Onco-fetal reprogramming of the tumor ecosystem induces fetal developmental signatures in the tumor microenvironment, leading to immunosuppressive features. Here, we employed single-cell RNA sequencing, spatial transcriptomics and bulk RNA sequencing to delineate specific cell subsets involved in hepatocellular carcinoma (HCC) relapse and response to immunotherapy. We identified POSTN + extracellular matrix cancer-associated fibroblasts (EM CAFs) as a prominent onco-fetal interacting hub, promoting tumor progression. Cell-cell communication and spatial transcriptomics analysis revealed crosstalk and co-localization of onco-fetal cells, including POSTN + CAFs, FOLR2 + macrophages and PLVAP + endothelial cells. Further analyses suggest an association between onco-fetal reprogramming and epithelial-mesenchymal transition (EMT), tumor cell proliferation and recruitment of T reg cells, ultimately influencing early relapse and response to immunotherapy. In summary, our study identifies POSTN + CAFs as part of the HCC onco-fetal niche and highlights its potential influence in EMT, relapse and immunotherapy response, paving the way for the use of onco-fetal signatures for therapeutic stratification.
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