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Identification of Suppressors of top-2 Embryonic Lethality in Caenorhabditis elegans.

Nirajan BhandariChristine RourkeThomas WilmothAlekya BheemreddyDavid SchulmanDina CollinsHarold E SmithAndy GoldenAimee Jaramillo-Lambert
Published in: G3 (Bethesda, Md.) (2020)
Topoisomerase II is an enzyme with important roles in chromosome biology. This enzyme relieves supercoiling and DNA and RNA entanglements generated during mitosis. Recent studies have demonstrated that Topoisomerase II is also involved in the segregation of homologous chromosomes during the first meiotic division. However, the function and regulation of Topoisomerase II in meiosis has not been fully elucidated. Here, we conducted a genetic suppressor screen in Caenorhabditis elegans to identify putative genes that interact with topoisomerase II during meiosis. Using a temperature-sensitive allele of topoisomerase II, top-2 ( it7ts ), we identified eleven suppressors of top-2-induced embryonic lethality. We used whole-genome sequencing and a combination of RNAi and CRISPR/Cas9 genome editing to identify and validate the responsible suppressor mutations. We found both recessive and dominant suppressing mutations that include one intragenic and 10 extragenic loci. The extragenic suppressors consist of a known Topoisomerase II-interacting protein and two novel interactors. We anticipate that further analysis of these suppressing mutations will provide new insights into the function of Topoisomerase II during meiosis.
Keyphrases
  • crispr cas
  • genome editing
  • genome wide
  • gene expression
  • dna damage
  • single molecule
  • oxidative stress
  • intellectual disability
  • protein kinase
  • genome wide association
  • genome wide analysis