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A comparison of RNA extraction and sequencing protocols for detection of small RNAs in plasma.

Ryan K Y WongMeabh MacMahonJayne V WoodsideDavid A Simpson
Published in: BMC genomics (2019)
Small RNAs were consistently detected using all RNA extraction and library preparation protocols tested, but with some miRNAs at significantly different levels. Choice of the most suitable protocol should be informed by the relative importance of minimising the total sequencing required, detection of rare miRNAs or absolute quantification.
Keyphrases
  • loop mediated isothermal amplification
  • single cell
  • real time pcr
  • label free
  • randomized controlled trial
  • high resolution
  • simultaneous determination