The Conformation of the Epidermal Growth Factor Receptor Transmembrane Domain Dimer Dynamically Adapts to the Local Membrane Environment.
Eduard V BocharovPavel E BraginKonstantin V PavlovOlga V BocharovaKonstantin S MineevAnton A PolyanskyPavel E VolynskyRoman G EfremovAlexander S ArsenievPublished in: Biochemistry (2017)
The epidermal growth factor receptor (EGFR) family is an important class of receptor tyrosine kinases, mediating a variety of cellular responses in normal biological processes and in pathological states of multicellular organisms. Different modes of dimerization of the human EGFR transmembrane domain (TMD) in different membrane mimetics recently prompted us to propose a novel signal transduction mechanism based on protein-lipid interaction. However, the experimental evidence for it was originally obtained with slightly different TMD fragments used in the two different mimetics, compromising the validity of the comparison. To eliminate ambiguity, we determined the nuclear magnetic resonance (NMR) structure of the bicelle-incorporated dimer of the EGFR TMD fragment identical to the one previously used in micelles. The NMR results augmented by molecular dynamics simulations confirm the mutual influence of the TMD and lipid environment, as is required for the proposed lipid-mediated activation mechanism. They also reveal the possible functional relevance of a subtle interplay between the concurrent processes in the lipid and protein during signal transduction.
Keyphrases
- epidermal growth factor receptor
- magnetic resonance
- molecular dynamics simulations
- tyrosine kinase
- advanced non small cell lung cancer
- fatty acid
- endothelial cells
- high resolution
- drug delivery
- small cell lung cancer
- molecular docking
- magnetic resonance imaging
- binding protein
- squamous cell carcinoma
- gene expression
- solid state
- genome wide
- dna methylation
- radiation therapy
- multidrug resistant
- single cell
- gram negative
- locally advanced
- induced pluripotent stem cells