Transcriptomic Response of the Liver Tissue in Trachinotus ovatus to Acute Heat Stress.
Qian-Qian LiJing ZhangHong-Yang WangSu-Fang NiuRen-Xie WuBao-Gui TangQing-Hua WangZhen-Bang LiangYan-Shan LiangPublished in: Animals : an open access journal from MDPI (2023)
Trachinotus ovatus is a major economically important cultured marine fish in the South China Sea. However, extreme weather and increased culture density result in uncontrollable problems, such as increases in water temperature and a decline in dissolved oxygen (DO), hindering the high-quality development of aquaculture. In this study, liver transcriptional profiles of T. ovatus were investigated under acute high-temperature stress (31 °C and 34 °C) and normal water temperature (27 °C) using RNA sequencing (RNA-Seq) technology. Differential expression analysis and STEM analysis showed that 1347 differentially expressed genes (DEGs) and four significant profiles (profiles 0, 3, 4, and 7) were screened, respectively. Of these DEGs, some genes involved in heat shock protein (HSPs), hypoxic adaptation, and glycolysis were up-regulated, while some genes involved in the ubiquitin-proteasome system (UPS) and fatty acid metabolism were down-regulated. Our results suggest that protein dynamic balance and function, hypoxia adaptation, and energy metabolism transformation are crucial in response to acute high-temperature stress. Our findings contribute to understanding the molecular response mechanism of T. ovatus under acute heat stress, which may provide some reference for studying the molecular mechanisms of other fish in response to heat stress.
Keyphrases
- heat stress
- heat shock
- liver failure
- rna seq
- high temperature
- single cell
- respiratory failure
- heat shock protein
- aortic dissection
- drug induced
- fatty acid
- transcription factor
- mental health
- gene expression
- hepatitis b virus
- endothelial cells
- dna methylation
- oxidative stress
- high resolution
- climate change
- genome wide
- mass spectrometry
- single molecule
- organic matter
- data analysis