In-silico heart model phantom to validate cardiac strain imaging.
Tanmay MukherjeeMuhammad UsmanRana Raza MehdiEmilio MendiolaJacques OhayonDiana LindquistDipan ShahSakthivel SadayappanRoderic PettigrewReza AvazmohammadiPublished in: bioRxiv : the preprint server for biology (2024)
The quantification of cardiac strains as structural indices of cardiac function has a growing prevalence in clinical diagnosis. However, the highly heterogeneous four-dimensional (4D) cardiac motion challenges accurate "regional" strain quantification and leads to sizable differences in the estimated strains depending on the imaging modality and post-processing algorithm, limiting the translational potential of strains as incremental biomarkers of cardiac dysfunction. There remains a crucial need for a feasible benchmark that successfully replicates complex 4D cardiac kinematics to determine the reliability of strain calculation algorithms. In this study, we propose an in-silico heart phantom derived from finite element (FE) simulations to validate the quantification of 4D regional strains. First, as a proof-of-concept exercise, we created synthetic magnetic resonance (MR) images for a hollow thick-walled cylinder under pure torsion with an exact solution and demonstrated that "ground-truth" values can be recovered for the twist angle, which is also a key kinematic index in the heart. Next, we used mouse-specific FE simulations of cardiac kinematics to synthesize dynamic MR images by sampling various sectional planes of the left ventricle (LV). Strains were calculated using our recently developed non-rigid image registration (NRIR) framework in both problems. Moreover, we studied the effects of image quality on distorting regional strain calculations by conducting in-silico experiments for various LV configurations. Our studies offer a rigorous and feasible tool to standardize regional strain calculations to improve their clinical impact as incremental biomarkers.
Keyphrases
- left ventricular
- magnetic resonance
- escherichia coli
- deep learning
- image quality
- high resolution
- monte carlo
- molecular dynamics
- heart failure
- machine learning
- computed tomography
- atrial fibrillation
- density functional theory
- molecular docking
- magnetic resonance imaging
- mental health
- oxidative stress
- contrast enhanced
- physical activity
- optical coherence tomography
- pulmonary artery
- signaling pathway
- coronary artery
- neural network
- climate change
- molecularly imprinted
- resistance training