Exploring the molecular interaction of pheniramine with Enterococcus faecalis homoserine kinase: In-silico studies.
Jyoti YadavHarpreet SinghSudhir Kumar PalSatyajeet DasVijay Kumar SrivastavaAnupam JyotiVinay SharmaSanjit KumarSanket KaushikPublished in: Journal of molecular recognition : JMR (2022)
Infections caused by the bacteria Enterococcus faecalis (also known as E. faecalis) are common in hospitals. This bacterium is resistant to a wide range of medicines and causes a variety of nosocomial infections. An increase in the number of infections caused by multidrug-resistant (MDR) bacteria is causing substantial economic and health issues around the world. Consequently, new therapeutic techniques to tackle the growing threat of E. faecalis infections must be developed as soon as possible. In this regard, we have targeted a protein that is regarded to be critical for the survival of bacteria in this experiment. Homoserine kinase (HSK) is a threonine metabolism enzyme that belongs to the GHMP kinase superfamily. It is a crucial enzyme in threonine metabolism. This enzyme is responsible for a critical step in the threonine biosynthesis pathway. Given the important function that E. faecalis Homoserine Kinase (ESK) plays in bacterial metabolism, we report here cloning, expression, purification and structural studies of E. faecalis HSK using homology modelling. In addition, we have reported on the model's molecular docking and Molecular Dynamic Stimulation (MD Stimulation) investigations to validate the results of the docking experiments. The results were promising. In silico investigations came up with the conclusion: pheniramine has good binding affinity for the E. faecalis HSK.
Keyphrases
- molecular docking
- protein kinase
- multidrug resistant
- molecular dynamics simulations
- healthcare
- tyrosine kinase
- molecular dynamics
- public health
- acinetobacter baumannii
- poor prognosis
- binding protein
- case control
- drug resistant
- protein protein
- cancer therapy
- mental health
- long non coding rna
- drug delivery
- small molecule
- human health
- transcription factor
- social media
- methicillin resistant staphylococcus aureus
- life cycle