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The Preservation of PPAR γ Genome Duplicates in Some Teleost Lineages: Insights into Lipid Metabolism and Xenobiotic Exploitation.

Inês PáscoaElza FonsecaRenato FerrazAndré M MachadoFrancisca ConradoRaquel RuivoIsabel CunhaLuís Filipe C Castro
Published in: Genes (2022)
Three peroxisome proliferator-activated receptor paralogues ( PPAR α , - β and - γ ) are currently recognized in vertebrate genomes. PPARγ is known to modulate nutrition, adipogenesis and immunity in vertebrates. Natural ligands of PPARγ have been proposed; however, the receptor also binds synthetic ligands such as endocrine disruptors. Two paralogues of PPAR α and PPAR β have been documented in teleost species, a consequence of the 3R WGD. Recently, two PPAR γ paralogue genes were also identified in Astyanax mexicanus . We aimed to determine whether the presence of two PPAR γ paralogues is prevalent in other teleost genomes, through genomic and phylogenetic analysis. Our results showed that besides Characiformes, two PPAR γ paralogous genes were also identified in other teleost taxa, coinciding with the teleost-specific, whole-genome duplication and with the retention of both genes prior to the separation of the Clupeocephala. To functionally characterize these genes, we used the European sardine ( Sardina pilchardus ) as a model. PPAR γA and PPAR γB display a different tissue distribution, despite the similarity of their functional profiles: they are unresponsive to tested fatty acids and other human PPARγ ligands yet yield a transcriptional response in the presence of tributyltin (TBT). This observation puts forward the relevance of comparative analysis to decipher alternative binding architectures and broadens the disruptive potential of man-made chemicals for aquatic species.
Keyphrases
  • fatty acid
  • insulin resistance
  • genome wide
  • endothelial cells
  • risk assessment
  • adipose tissue
  • transcription factor
  • mass spectrometry
  • oxidative stress
  • bioinformatics analysis
  • heat stress
  • heat shock