Meta-analysis of genotype-phenotype associations in Bardet-Biedl syndrome uncovers differences among causative genes.
Veronika NiederlovaMartin ModrákOksana TsyklauriMartina HuranovaOndrej StepanekPublished in: Human mutation (2019)
Bardet-Biedl syndrome (BBS) is a recessive genetic disease causing multiple organ anomalies. Most patients carry mutations in genes encoding for the subunits of the BBSome, an octameric ciliary transport complex, or accessory proteins involved in the BBSome assembly or function. BBS proteins have been extensively studied using in vitro, cellular, and animal models. However, the molecular functions of particular BBS proteins and the etiology of the BBS symptoms are still largely elusive. In this study, we applied a meta-analysis approach to study the genotype-phenotype association in humans using our database of all reported BBS patients. The analysis revealed that the identity of the causative gene and the character of the mutation partially predict the clinical outcome of the disease. Besides their potential use for clinical prognosis, our analysis revealed functional differences of particular BBS genes in humans. Core BBSome subunits BBS2, BBS7, and BBS9 manifest as more critical for the function and development of kidneys than peripheral subunits BBS1, BBS4, and BBS8/TTC8, suggesting that incomplete BBSome retains residual function at least in the kidney.
Keyphrases
- end stage renal disease
- genome wide
- systematic review
- ejection fraction
- chronic kidney disease
- newly diagnosed
- randomized controlled trial
- peritoneal dialysis
- emergency department
- depressive symptoms
- copy number
- intellectual disability
- case report
- single cell
- genome wide analysis
- autism spectrum disorder
- electronic health record
- patient reported outcomes
- patient reported