RiboMiner: a toolset for mining multi-dimensional features of the translatome with ribosome profiling data.
Fajin LiXudong XingZhengtao XiaoGang XuXuerui YangPublished in: BMC bioinformatics (2020)
Applications of RiboMiner on two published datasets did not only reproduced the main results reported before, but also generated novel insights into the translation regulation processes. Therefore, being complementary to the current tools, RiboMiner could be a valuable resource for dissections of the translation landscapes and the translation regulations by mining the ribosome profiling data more comprehensively and with higher resolution. RiboMiner is freely available at https://github.com/xryanglab/RiboMiner and https://pypi.org/project/RiboMiner .