Login / Signup

Characterization of a human liver reference material fit for proteomics applications.

W Clay DavisLisa E KilpatrickDebra L EllisorBenjamin A Neely
Published in: Scientific data (2019)
The National Institute of Standards and Technology (NIST) is creating new, economical, qualitative reference materials and data for proteomics comparisons, benchmarking and harmonization. Here we describe a large dataset from shotgun proteomic analysis of RM 8461 Human Liver for Proteomics, a reference material being developed. Consensus identifications using multiple search engines and sample preparations demonstrate a homogeneous and fit-for-purpose material that can be incorporated into automated or manual sample preparation workflows, with the resulting data used to directly assess complete sample-to-data workflows and provide harmonization and benchmarking between laboratories and techniques. Data are available via PRIDE with identifier PXD013608.
Keyphrases
  • electronic health record
  • mass spectrometry
  • big data
  • label free
  • machine learning
  • systematic review
  • high throughput
  • artificial intelligence
  • liquid chromatography