Human Amniotic Epithelial Cells as a Tool to Investigate the Effects of Cyanidin 3-O-Glucoside on Cell Differentiation.
Shinya TakahashiFarhana FerdousiYun-Wen ZhengTatsuya OdaHiroko IsodaPublished in: International journal of molecular sciences (2021)
Cyanidin, a kind of anthocyanin, has been reported to have chemotherapeutic activities in humans. Human amniotic epithelial cells (hAECs) are considered a potential source of pluripotent stem cells. hAECs have been used as a novel tool in regenerative cellular therapy and cell differentiation studies. In this study, to explore the effects of cyanidin-3-O-glucoside (Cy3G) on hAECs and their mechanisms, we investigated the transcriptomic changes in the Cy3G-treated cells using microarray analysis. Among the differentially expressed genes (Fold change > 1.1; p-value < 0.05), 109 genes were upregulated and 232 were downregulated. Ratios of upregulated and downregulated genes were 0.22% and 0.47% of the total expressed genes, respectively. Next, we explored the enriched gene ontology, i.e., the biological process, molecular function, and cellular component of the 37 upregulated (>1.3-fold change) and 124 downregulated (<1.3-fold change) genes. Significantly enriched biological processes by the upregulated genes included "response to muscle activity," and the genes involved in this gene ontology (GO) were Metrnl and SRD5A1, which function in the adipocyte. On the other hand, the cell cycle biological process was significantly enriched by the downregulated genes, including some from the SMC gene family. An adipogenesis-associated gene DDX6 was also included in the cell cycle biological process. Thus, our findings suggest the prospects of Cy3G in modulating adipocyte differentiation in hAECs.
Keyphrases
- genome wide
- genome wide identification
- cell cycle
- bioinformatics analysis
- genome wide analysis
- pluripotent stem cells
- cell proliferation
- dna methylation
- stem cells
- adipose tissue
- transcription factor
- copy number
- insulin resistance
- mesenchymal stem cells
- type diabetes
- metabolic syndrome
- gene expression
- signaling pathway
- umbilical cord
- single molecule
- skeletal muscle
- cell cycle arrest
- endoplasmic reticulum stress
- atomic force microscopy