Investigating Associations between HLA-DR Genotype, H. pylori Infection, and Anti-CagA IgA Seropositivity in a Turkish Gastritis Cohort.
Lokman KarataşZeynep TatarEddie A JamesMukaddes ColakogullariPublished in: Genes (2024)
Helicobacter pylori ( H. pylori ) is associated with gastric inflammation and mucosal antibodies against its cytotoxin-associated gene A (CagA) are protective. Vaccine-elicited immunity against H. pylori requires MHC class II expression, indicating that CD4+ T cells are protective. We hypothesized that the HLA-DR genotypes in human populations include protective alleles that more effectively bind immunogenic CagA peptide fragments and susceptible alleles with an impaired capacity to present CagA peptides. We recruited patients (n = 170) admitted for gastroendoscopy procedures and performed high-resolution HLA-DRB1 typing. Serum anti-CagA IgA levels were analyzed by ELISA (23.2% positive) and H. pylori classified as positive or negative in gastric mucosal tissue slides (72.9% positive). Pearson Chi-square analysis revealed that H. pylori infection was significantly increased in DRB1*11:04-positive individuals ( p = 0.027). Anti-CagA IgA was significantly decreased in DRB1*11:04 positive individuals ( p = 0.041). In contrast, anti-CagA IgA was significantly increased in DRB1*03:01 positive individuals ( p = 0.030). For these HLA-DRB1 alleles of interest, we utilized two in silico prediction methods to compare their capacity to present CagA peptides. Both methods predicted increased numbers of peptides for DRB1*03:01 than DRB1*11:04. In addition, both alleles preferred distinctively different CagA 15mer peptide sequences for high affinity binding. These observations suggest that DRB1*11:04 is a susceptible genotype with impaired CagA immunity, whereas DRB1*03:01 is a protective genotype that promotes enhanced CagA immunity.
Keyphrases
- helicobacter pylori
- helicobacter pylori infection
- high resolution
- endothelial cells
- magnetic resonance
- poor prognosis
- computed tomography
- oxidative stress
- mass spectrometry
- genome wide
- newly diagnosed
- ejection fraction
- gene expression
- long non coding rna
- amino acid
- copy number
- patient reported outcomes
- ulcerative colitis
- monoclonal antibody
- patient reported