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Structural and biochemical characterization of the novel serpin Iripin-5 from Ixodes ricinus.

Barbora KascakovaJan KotálLarissa Almeida MartinsZuzana BerankovaHelena LanghansováEric CalvoJoel A CrossleyPetra HavlickovaFilip DyckaTatyana PrudnikovaMichal KutyMichalis KotsyfakisJindrich ChmelarIvana Kuta Smatanova
Published in: Acta crystallographica. Section D, Structural biology (2021)
Iripin-5 is the main Ixodes ricinus salivary serpin, which acts as a modulator of host defence mechanisms by impairing neutrophil migration, suppressing nitric oxide production by macrophages and altering complement functions. Iripin-5 influences host immunity and shows high expression in the salivary glands. Here, the crystal structure of Iripin-5 in the most thermodynamically stable state of serpins is described. In the reactive-centre loop, the main substrate-recognition site of Iripin-5 is likely to be represented by Arg342, which implies the targeting of trypsin-like proteases. Furthermore, a computational structural analysis of selected Iripin-5-protease complexes together with interface analysis revealed the most probable residues of Iripin-5 involved in complex formation.
Keyphrases
  • nitric oxide
  • poor prognosis
  • signaling pathway
  • transcription factor
  • single cell
  • hydrogen peroxide
  • binding protein