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Comparison of T-cell receptor diversity of people with myalgic encephalomyelitis versus controls.

Joshua J DibbleBen FerneyhoughMatthew RoddisSam MillingtonMichael D FischerNick J ParkinsonChris P Ponting
Published in: BMC research notes (2024)
To test this hypothesis, we sequenced the genomic loci of α/δ, β and γ T-cell receptors (TCR) from 40 human blood samples from each of four groups: severely affected people with ME; mildly or moderately affected people with ME; people diagnosed with Multiple Sclerosis, as disease controls; and, healthy controls. Seeking to automatically classify these individuals' samples by their TCR repertoires, we applied P-SVM, a machine learning method. However, despite working well on a simulated data set, this approach did not allow statistically significant partitioning of samples into the four subgroups. Our findings do not support the hypothesis that blood samples from people with ME frequently contain altered T-cell receptor diversity.
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