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Validation of a Droplet Digital PCR (ddPCR) Assay to Detect Cyanobacterial 16S rDNA in Human Lung Tissue.

Rachael E BarneyGuohong HuangTorrey L GallagherMaeve TischbeinJohn C DeWittRachel MartindaleEthan M P LaRochelleGregory J TsongalisElijah W Stommel
Published in: Toxics (2023)
Cyanobacteria produce a variety of secondary metabolites, including toxins that may contribute to the development of disease. Previous work was able to detect the presence of a cyanobacterial marker in human nasal and broncoalveolar lavage samples; however, it was not able to determine the quantification of the marker. To further research the relationship between cyanobacteria and human health, we validated a droplet digital polymerase chain reaction (ddPCR) assay to simultaneously detect the cyanobacterial 16S marker and a human housekeeping gene in human lung tissue samples. The ability to detect cyanobacteria in human samples will allow further research into the role cyanobacteria plays in human health and disease.
Keyphrases
  • human health
  • risk assessment
  • endothelial cells
  • high throughput
  • induced pluripotent stem cells
  • climate change
  • pluripotent stem cells
  • single cell
  • ms ms
  • copy number