Nervous Necrosis Virus Modulation of European Sea Bass ( Dicentrarchus labrax , L.) Immune Genes and Transcriptome towards Establishment of Virus Carrier State.
Dimitra K ToubanakiAntonia EfstathiouOdysseas-Panagiotis TzortzatosMichail-Aggelos ValsamidisLeonidas PapaharisisVasileios BakopoulosEvdokia KaragouniPublished in: International journal of molecular sciences (2023)
Viral infections of teleost fish have great environmental and economic implications in aquaculture. Nervous necrosis virus (NNV) is a pathogen affecting more than 120 different species, causing high mortality and morbidity. Herein, we studied the course of NNV experimental infection of D. labrax , focusing on survivors which indicated viral carrier state. To determine the carrier state of D. labrax head kidney, we performed a gene expression analysis of selected immune-related genes and we profiled its transcriptome 14 days post infection (dpi). All tested genes showed clear differentiations in expression levels while most of them were up-regulated 14 dpi suggesting that their role is not limited in early antiviral responses, but they are also implicated in disease persistence. To gain a better understanding of the fish that survived the acute infection but still maintained a high viral load, we studied the differential expression of 124 up-regulated and 48 down-regulated genes in D. labrax head kidney, at 14 dpi. Concluding, the NNV virus persistent profile was assessed in D. labrax , where immune-related gene modification was intense (14 dpi) and the head kidney transcriptome profile at this time point offered a glimpse into host attempts to control the infection in asymptomatic carriers.
Keyphrases
- genome wide
- gene expression
- dna methylation
- genome wide identification
- transcription factor
- single cell
- rna seq
- sars cov
- optic nerve
- poor prognosis
- cardiovascular disease
- young adults
- copy number
- bioinformatics analysis
- type diabetes
- genome wide analysis
- cardiovascular events
- coronary artery disease
- disease virus
- hepatitis b virus
- climate change
- binding protein
- intensive care unit
- risk assessment
- aortic dissection