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Quantitative Prediction of Rate Constants for Aqueous Racemization To Avoid Pointless Stereoselective Syntheses.

Andrew BallardHiwa O AhmadStefania NarduoloLucy RosaNikki ChandDavid A CosgrovePeter VarkonyiNabil AsaadSimone TomasiNiklaas J BuurmaAndrew G Leach
Published in: Angewandte Chemie (International ed. in English) (2017)
Racemization has a large impact upon the biological properties of molecules but the chemical scope of compounds with known rate constants for racemization in aqueous conditions was hitherto limited. To address this remarkable blind spot, we have measured the kinetics for racemization of 28 compounds using circular dichroism and 1 H NMR spectroscopy. We show that rate constants for racemization (measured by ourselves and others) correlate well with deprotonation energies from quantum mechanical (QM) and group contribution calculations. Such calculations thus provide predictions of the second-order rate constants for general-base-catalyzed racemization that are usefully accurate. When applied to recent publications describing the stereoselective synthesis of compounds of purported biological value, the calculations reveal that racemization would be sufficiently fast to render these expensive syntheses pointless.
Keyphrases
  • density functional theory
  • molecular dynamics
  • molecular dynamics simulations
  • high resolution
  • monte carlo
  • gene expression
  • room temperature
  • genome wide
  • dna methylation
  • aqueous solution