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VALENCIA: a nearest centroid classification method for vaginal microbial communities based on composition.

Michael T FranceBing MaPawel GajerSarah BrownMichael S HumphrysJohanna B HolmL Elaine WaetjenRebecca M BrotmanJacques Ravel
Published in: Microbiome (2020)
VALENCIA provides a much-needed solution for the robust and reproducible assignment of vaginal community state types. This will allow unbiased analysis of both small and large vaginal microbiota datasets, comparisons between datasets and meta-analyses that combine multiple datasets. Video abstract.
Keyphrases
  • meta analyses
  • rna seq
  • systematic review
  • machine learning
  • healthcare
  • mental health
  • deep learning
  • randomized controlled trial
  • single cell