Intra- and Interspecies Spread of a Novel Conjugative Multidrug Resistance IncC Plasmid Coharboring bla OXA-181 and armA in a Cystic Fibrosis Patient.
Javier E FernandezHelena M B Seth-SmithPatrice NordmannAdrian EgliAndrea EndimianiVincent PerretenPublished in: Microbiology spectrum (2022)
A novel multidrug resistance conjugative 177,859-bp IncC plasmid pJEF1-OXA-181 coharboring the carbapenemase-coding bla OXA181 and the aminoglycoside resistance 16S rRNA methyltransferase-coding armA genes was detected in two unrelated Escherichia coli gut isolates of ST196 and ST648, as well as two ST35 Klebsiella pneumoniae gut and sputum isolates of a cystic fibrosis patient. The armA gene was located within the antimicrobial resistance island ARI-A and the bla OXA181 gene, which was preceded by IS 903 and IS Ecp1Δ was inserted within the transfer genes region without affecting conjugation ability. Comparative plasmid analysis with other related IncC plasmids showed the presence of bla OXA181 , as well as its integration site, are thus far unique for these types of plasmids. This study illustrates the potential of a promiscuous multidrug resistance plasmid to acquire antibiotic resistance genes and to disseminate in the gut of the same host. IMPORTANCE Colocalization of carbapenemases and aminoglycoside resistance 16S rRNA methylases on a multidrug resistance conjugative plasmid poses a serious threat to public health. Here, we describe the novel IncC plasmid pJEF1-OXA-181 cocarrying bla OXA-181 and armA as well as several other antimicrobial resistance genes (ARGs) in different Enterobacterales isolates of the sputum and gut microbiota of a cystic fibrosis patient. IncC plasmids are conjugative, promiscuous elements which can incorporate accessory antimicrobial resistance islands making them key players in ARGs spread. This plasmid was thus far unique among IncC plasmids to contain a bla OXA-181 which was integrated in the transfer gene region without affecting its conjugation ability. This study highlights that new plasmids may be introduced into a hospital through different species hosted in one single patient. It further emphasizes the need of continuous surveillance of multidrug-resistant bacteria in patients at risk to avoid spread of such plasmids in the health care system.
Keyphrases
- klebsiella pneumoniae
- escherichia coli
- antimicrobial resistance
- antibiotic resistance genes
- cystic fibrosis
- multidrug resistant
- pseudomonas aeruginosa
- genome wide
- public health
- genome wide identification
- microbial community
- wastewater treatment
- acinetobacter baumannii
- case report
- biofilm formation
- lung function
- anaerobic digestion
- copy number
- genome wide analysis
- mycobacterium tuberculosis
- healthcare
- drug resistant
- dna methylation
- gram negative
- bioinformatics analysis
- air pollution
- global health
- climate change
- electronic health record
- chronic obstructive pulmonary disease
- data analysis