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Correlating Cystic Fibrosis Transmembrane Conductance Regulator Function with Clinical Features to Inform Precision Treatment of Cystic Fibrosis.

Allison F McCagueKaren S RaraighMatthew J PellicoreEmily F Davis-MarcisakTaylor A EvansSangwoo T HanZhongzhou LuAnya T JoyntNeeraj SharmaCarlo CastellaniJoseph M CollacoMary CoreyMichelle H LewisChris M PenlandJohanna M RommensAnne L StephensonPatrick R SosnayGarry R Cutting
Published in: American journal of respiratory and critical care medicine (2020)
Rationale: The advent of precision treatment for cystic fibrosis using small-molecule therapeutics has created a need to estimate potential clinical improvements attributable to increases in cystic fibrosis transmembrane conductance regulator (CFTR) function. Objectives: To derive CFTR function of a variety of CFTR genotypes and correlate with key clinical features (sweat chloride concentration, pancreatic exocrine status, and lung function) to develop benchmarks for assessing response to CFTR modulators. Methods: CFTR function assigned to 226 unique CFTR genotypes was correlated with the clinical data of 54,671 individuals enrolled in the Clinical and Functional Translation of CFTR (CFTR2) project. Cross-sectional FEV1% predicted measurements were plotted by age at which measurement was obtained. Shifts in sweat chloride concentration and lung function reported in CFTR modulator trials were compared with function-phenotype correlations to assess potential efficacy of therapies. Measurements and Main Results: CFTR genotype function exhibited a logarithmic relationship with each clinical feature. Modest increases in CFTR function related to differing genotypes were associated with clinically relevant improvements in cross-sectional FEV1% predicted over a range of ages (6-82 yr). Therapeutic responses to modulators corresponded closely to predictions from the CFTR2-derived relationship between CFTR genotype function and phenotype. Conclusions: Increasing CFTR function in individuals with severe disease will have a proportionally greater effect on outcomes than similar increases in CFTR function in individuals with mild disease and should reverse a substantial fraction of the disease process. This study provides reference standards for clinical outcomes that may be achieved by increasing CFTR function.
Keyphrases
  • cystic fibrosis
  • lung function
  • pseudomonas aeruginosa
  • small molecule
  • cross sectional
  • chronic obstructive pulmonary disease
  • skeletal muscle
  • big data
  • early onset
  • human health
  • insulin resistance
  • neural network