Transcriptome and Proteome Analysis Revealed Key Pathways Regulating Final Stage of Oocyte Maturation of the Turkey (Meleagris gallopavo).
Mariola SłowińskaŁukasz PauksztoLaura PardyakJan Paweł JastrzębskiEwa LiszewskaJoanna WisniewskaKrzysztof KozłowskiJan JankowskiBarbara BilinskaAndrzej CiereszkoPublished in: International journal of molecular sciences (2021)
In birds, the zona pellucida (ZP) matrix that surrounds the ovulated oocyte-called the inner perivitelline layer-is involved in sperm-zona interaction and successful fertilization. To identify the important genes and proteins connected with the final step of egg development, next-generation sequencing and two-dimensional electrophoresis, combined with mass spectrometry, were used for the analysis of mature oocytes at the F1 developmental stage. A total of 8161 genes and 228 proteins were annotated. Six subfamilies of genes, with codes ZP, ZP1-4, ZPD, and ZPAX, were identified, with the dominant expression of ZPD. The main expression site for ZP1 was the liver; however, granulosa cells may also participate in local ZP1 secretion. A ubiquitination system was identified in mature oocytes, where ZP1 was found to be the main ubiquitinated protein. Analysis of transcripts classified in estrogen receptor (ESR) signaling indicated the presence of ESR1 and ESR2, as well as a set of estrogen-dependent genes involved in both genomic and nongenomic mechanisms for the regulation of gene expression by estrogen. Oxidative phosphorylation was found to be a possible source of adenosine triphosphate, and the nuclear factor erythroid 2-related factor 2 signaling pathway could be involved in the response against oxidative stress. Oocyte-granulosa cell communication by tight, adherens, and gap junctions seems to be essential for the final step of oocyte maturation.
Keyphrases
- estrogen receptor
- gene expression
- nuclear factor
- genome wide
- induced apoptosis
- single cell
- oxidative stress
- poor prognosis
- signaling pathway
- mass spectrometry
- bioinformatics analysis
- dna methylation
- genome wide identification
- binding protein
- toll like receptor
- copy number
- rna seq
- endoplasmic reticulum stress
- high resolution
- epithelial mesenchymal transition
- long non coding rna
- polycystic ovary syndrome
- type diabetes
- blood brain barrier
- stem cells
- cell cycle arrest
- metabolic syndrome
- mesenchymal stem cells
- transcription factor
- cell death
- protein protein
- small molecule
- insulin resistance
- cell proliferation
- cell therapy
- gas chromatography