RCSB protein Data Bank: exploring protein 3D similarities via comprehensive structural alignments.

Sebastian Bittrich Joan Segura Jose M Duarte Stephen K Burley Yana Valasatava

Published in: Bioinformatics (Oxford, England) (2024)

The alignment tool is part of the RCSB PDB research-focused RCSB.org web portal and available at rcsb.org/alignment. Programmatic access is available via alignment.rcsb.org. Frontend code has been published at github.com/rcsb/rcsb-pecos-app. Visualization is powered by the open-source Mol* viewer (github.com/molstar/molstar and github.com/molstar/rcsb-molstar) plus the Sequence Annotations in 3D Viewer (github.com/rcsb/rcsb-saguaro-3d).

Keyphrases

randomized controlled trial
machine learning
amino acid
small molecule
big data
deep learning
meta analyses