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X-ray transparent microfluidic chips for high-throughput screening and optimization of in meso membrane protein crystallization.

Jeremy M SchiefersteinAshtamurthy S PawateChang SunFrank WanPaige N SheradenJana BroeckerOliver P ErnstRobert B GennisPaul J A Kenis
Published in: Biomicrofluidics (2017)
Elucidating and clarifying the function of membrane proteins ultimately requires atomic resolution structures as determined most commonly by X-ray crystallography. Many high impact membrane protein structures have resulted from advanced techniques such as in meso crystallization that present technical difficulties for the set-up and scale-out of high-throughput crystallization experiments. In prior work, we designed a novel, low-throughput X-ray transparent microfluidic device that automated the mixing of protein and lipid by diffusion for in meso crystallization trials. Here, we report X-ray transparent microfluidic devices for high-throughput crystallization screening and optimization that overcome the limitations of scale and demonstrate their application to the crystallization of several membrane proteins. Two complementary chips are presented: (1) a high-throughput screening chip to test 192 crystallization conditions in parallel using as little as 8 nl of membrane protein per well and (2) a crystallization optimization chip to rapidly optimize preliminary crystallization hits through fine-gradient re-screening. We screened three membrane proteins for new in meso crystallization conditions, identifying several preliminary hits that we tested for X-ray diffraction quality. Further, we identified and optimized the crystallization condition for a photosynthetic reaction center mutant and solved its structure to a resolution of 3.5 Å.
Keyphrases
  • high throughput
  • high resolution
  • single cell
  • circulating tumor cells
  • dual energy
  • electron microscopy
  • machine learning
  • air pollution
  • magnetic resonance imaging
  • computed tomography
  • fatty acid